Identifying Group-specific Contigs for Metagenomic Samples with Long k-tuple Sequence Signature

CAL-tuple

CAL-tuple is an effective pipeline to identify group-specific contigs for metagenomic samples with 40-tuple sequence signature.

Usage

CAL-tuple  implemented and executed under Linux-like platform. The manual of this pipeline is provided.

Downloads

•        The pipeline relevant source code.
•      The testing dataset is downloaded here. (Download)

Development Team

The whole pipeline was designed and implemented by Ying Wang’s group, Automation Department, Xiamen University, P.R.China. Any feedbacks and requests are more than welcome to wangying@xmu.edu.cn or NealSong1990@gmail.com.